Cydney B Nielsen: search on Z-Library

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1

Visualizing biological data—now and in the future

O'Donoghue, Seán I, Gavin, Anne-Claude, Gehlenborg, Nils, Goodsell, David S, Hériché, Jean-Karim, Nielsen, Cydney B, North, Chris, Olson, Arthur J, Procter, James B, Shattuck, David W

Journal:

Year:

2010

Language:

english

File:

PDF, 336 KB

english, 2010

2

The Human Epigenome Browser at Washington University

Zhou, Xin, Maricque, Brett, Xie, Mingchao, Li, Daofeng, Sundaram, Vasavi, Martin, Eric A, Koebbe, Brian C, Nielsen, Cydney, Hirst, Martin, Farnham, Peggy, Kuhn, Robert M, Zhu, Jingchun, Smirnov, Ivan,

Journal:

Year:

2011

Language:

english

File:

PDF, 381 KB

english, 2011

3

ChAsE: Chromatin analysis and exploration tool

Younesy, Hamid, Nielsen, Cydney B., Lorincz, Matthew C., Jones, Steven J.M., Karimi, Mohammad M., Möller, Torsten

Journal:

Year:

2016

Language:

english

File:

PDF, 182 KB

english, 2016

4

Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing

Laks, Emma, McPherson, Andrew, Zahn, Hans, Lai, Daniel, Steif, Adi, Brimhall, Jazmine, Biele, Justina, Wang, Beixi, Masud, Tehmina, Ting, Jerome, Grewal, Diljot, Nielsen, Cydney, Leung, Samantha, Boji

Journal:

Year:

2019

Language:

english

File:

PDF, 10.49 MB

english, 2019

5

Clonal genotype and population structure inference from single-cell tumor sequencing

Roth, Andrew, McPherson, Andrew, Laks, Emma, Biele, Justina, Yap, Damian, Wan, Adrian, Smith, Maia A, Nielsen, Cydney B, McAlpine, Jessica N, Aparicio, Samuel, Bouchard-Côté, Alexandre, Shah, Sohrab P

Journal:

Year:

2016

Language:

english

File:

PDF, 822 KB

english, 2016

6

[IEEE 2011 IEEE Symposium on Biological Data Visualization - Providence, RI (2011.10.23-2011.10.24)] 2011 IEEE Symposium on Biological Data Visualization (BioVis). - Challenges session

Nielsen, Cydney, Olson, Arthur, Supatto, Willy

Year:

2011

Language:

english

File:

PDF, 43 KB

english, 2011

7

DNA polymerase gene sequences indicate western and forest tent caterpillar viruses form a new taxonomic group within baculoviruses

Cydney B Nielsen, Dawn Cooper, Steven M Short, Judith H Myers, Curtis A Suttle

Journal:

Journal of Invertebrate Pathology

Year:

2002

Language:

english

File:

PDF, 681 KB

english, 2002

8

Visualization: A Mind–Machine Interface for Discovery

Nielsen, Cydney B.

Journal:

Trends in Genetics

Year:

2016

Language:

english

File:

PDF, 474 KB

english, 2016

9

Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs

Leung, Anthony K L, Young, Amanda G, Bhutkar, Arjun, Zheng, Grace X, Bosson, Andrew D, Nielsen, Cydney B, Sharp, Phillip A

Journal:

Nature Structural and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 70 KB

english, 2011

10

Highlights from the 5th Symposium on Biological Data Visualization: Part 2

Jan Aerts,G Elisabeta Marai,Kay Nieselt,Cydney Nielsen,Marc Streit…

Journal:

BMC Proceedings

Year:

2015

Language:

english

File:

PDF, 252 KB

english, 2015

11

Highlights from the 5th Symposium on Biological Data Visualization: Part 1

Jan Aerts,G Elisabeta Marai,Kay Nieselt,Cydney Nielsen…

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 157 KB

english, 2015

12

Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs

Leung, Anthony K L, Young, Amanda G, Bhutkar, Arjun, Zheng, Grace X, Bosson, Andrew D, Nielsen, Cydney B, Sharp, Phillip A

Journal:

Nature Structural and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 774 KB

english, 2011

13

Visualizing genomes: techniques and challenges

Nielsen, Cydney B, Cantor, Michael, Dubchak, Inna, Gordon, David, Wang, Ting

Journal:

Year:

2010

Language:

english

File:

PDF, 993 KB

english, 2010

14

Patterns of Intron Gain and Loss in Fungi

Nielsen, Cydney B., Friedman, Brad, Birren, Bruce, Burge, Christopher B., Galagan, James E.

Journal:

Year:

2004

Language:

english

File:

PDF, 527 KB

english, 2004

15

Points of view: Representing genomic structural variation

Nielsen, Cydney, Wong, Bang

Journal:

Year:

2012

Language:

english

File:

PDF, 142 KB

english, 2012

16

Biased Chromatin Signatures around Polyadenylation Sites and Exons

Noah Spies, Cydney B. Nielsen, Richard A. Padgett, Christopher B. Burge

Journal:

Year:

2009

Language:

english

File:

PDF, 1.38 MB

english, 2009

17

Points of view: Managing deep data in genome browsers

Nielsen, Cydney, Wong, Bang

Journal:

Year:

2012

Language:

english

File:

PDF, 270 KB

english, 2012

18

E-scape: interactive visualization of single-cell phylogenetics and cancer evolution

Smith, Maia A, Nielsen, Cydney B, Chan, Fong Chun, McPherson, Andrew, Roth, Andrew, Farahani, Hossein, Machev, Daniel, Steif, Adi, Shah, Sohrab P

Journal:

Year:

2017

Language:

english

File:

PDF, 465 KB

english, 2017

19

Conserved role of intragenic DNA methylation in regulating alternative promoters

Maunakea, Alika K., Nagarajan, Raman P., Bilenky, Mikhail, Ballinger, Tracy J., D’Souza, Cletus, Fouse, Shaun D., Johnson, Brett E., Hong, Chibo, Nielsen, Cydney, Zhao, Yongjun

Journal:

Year:

2010

Language:

english

File:

PDF, 646 KB

english, 2010

20

Variant View: Visualizing Sequence Variants in their Gene Context

Ferstay, Joel A., Nielsen, Cydney B., Munzner, Tamara

Journal:

IEEE Transactions on Visualization and Computer Graphics

Year:

2013

Language:

english

File:

PDF, 964 KB

english, 2013

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